Publications

• Kang, X., & Carey, J. (1999) "Role of Heme in Structural Organization of Cytochrome c Probed by Semisynthesis," submitted to Biochemistry.
  
  
• Carey, J. (1999) "Globularity and Protein Function," J. Biomol. Str. Dyn., in press.
  
  
• Carey, J. (1999) "A Systematic, General Proteolytic Method for Defining Structural and Functional Domains of Proteins," Meths. Enzymol., in press.
  
  
• Wallqvist, A., Lavoie, T.A., Chanatry, J.A., Covell, D.G., & Carey, J., "Cooperative Folding Units in E. coli Tryptophan Repressor," Biophys. J., in press.
  
  
• Kang, X., & Carey, J. (1999) "Structural Organization in Peptide Fragments of Cytochrome c by Heme Binding,"J. Mol. Biol., 285, 463-468.
  
  
• Jin, L., Fukayama, J.W., Pelczer, I., & Carey, J. (1999) "Long-range Effects on Dynamics in a Temperature-sensitive Mutant of trp Repressor," J. Mol. Biol., 285, 361-378.
  
  
• Winters, M.A., Frankel, D.Z., Debenedetti, P.G., Carey, J., Devaney, M., & Przybycien, T.M. (1999) "Protein Purification with Vapor-Phase Carbon Dioxide," Biotech. Bioeng., 62, 247-258.
  
  
• Sunnerhagen, M., Denisov, V.P., Venu, K., Carey, J., Halle, B., & Otting, G. (1998) "Water Molecules in DNA Recognition. I. Hydration Lifetimes of the trp Operator in Solution Measured by NMR Spectroscopy," J. Mol. Biol., 282, 847-858.
  
  
• Grandori, R., Khalifah, P., Boice, J.A., Fairman, R., Giovanielli, K., & Carey, J. (1998) "Biochemical Characterization of WrbA, Founding Member of a New Family of Multimeric Flavodoxins," J. Biol. Chem., 273, 20960-20966.
  
  
• Szwajkajzer, D. & Carey, J. (1997) "Molecular and Biological Constraints on Ligand-binding Affinity and Specificity," Bioploymers, 44, 181-198.
  
  
• Sunnerhagen, M.S., Nilges, M., Otting, G., & Carey, J., (1997) "Solution Structure of the DNA-binding Domain and Model for the Complex of Multifunctional, Hexameric Arginine Repressor with DNA," Nature Structural Biology, 4, 819-825.
  
  
• Grandori, R., Struck, K., Giovanielli, K., & Carey, J. (1997) "A Three-Step Protocol for Construction of Chimeric Proteins," Protein Engineering, 10, 1099-1100.
  
  
• Winters, M.A., Debenedetti, P.G., Carey, J., Sparks, H.G., Sane, S.U., & Przybycien, T.M. (1997) "Long-Term Storage of Supercritically-Processed Microparticulate Protein Powders," Pharm. Res., 14, 1370-1378.
  
  
• Yang, J., Gunasekera, A., Lavoie, T.A., Jin, L., Lewis, D.E.A., & Carey, J. (1996) "In vivo and in vitro Studies of TrpR-DNA Interactions," J. Mol. Biol., 258, 37-52.
  
  
• Grandori, R., Lavoie, T.A., Pflumm, M., Tian, G., Niersbach, H., Maas, W.K., Fairman, R., & Carey, J., (1995) "The DNA-Binding Domain of the Hexameric Arginine Repressor, " J. Mol. Biol., 254, 150-162.
  
  
• Yang, J., & Carey, J. (1995) "Footprint Phenotypes: Structural Models for DNA-Binding Proteins from Chemical Modification-Protection Analysis of DNA," Meths. Enzymol., 259, 452-468.
  
  
• Lavoie, T.A., & Carey, J. (1994) "Being Direct," Nature Str. Biol., 1, 679.
  
  
• Grandori, R., & Carey, J. (1994) "Six New Candidate Members of the a/ß Twisted Open-Sheet Family Detected by Sequence Similarity to Flavodoxins," Prot. Sci., 3, 2185-2193.
  
  
• Martin, K.S., Royer, C.A., Howard, K.P., Carey, J., Liu, Y.-C., Matthews, K.S., Heyduk, E., and Lee, J.C. (1994) "Salt, High pH, and Corepressor Destabilize Higher Order Oligomers of the trp Repressor Dimer," Biophys. J., 66, 1167-1173.
  
  
• Wu, L.C., Grandori, R., & Carey, J. (1994) "Autonomous Subdomains in Protein Folding," Protein Science, 3, 369-371.
  
  
• Lavoie, T.A. & Carey, J. (1994) "Adaptability and Specificity in DNA Binding by trp Repressor," Nucleic Acids & Molecular Biology, 8, 184-196.
  
  
• Grandori, R., & Carey, J. (1994) "Two Highly Homologous Putative DNA-Binding Proteins in Yeast and E. coli," Trends in Biochemical Sciences, 19, 72.
  
  
• Lawson, C.L., & Carey, J. (1993) "Tandem Binding in Crystals of a trp Repressor/Operator Half-site Complex," Nature, 366, 178-182.
  
  
• Wu, L.C., Laub, P., Elöve, G., Carey, J., & Roder, H. (1993) "A Noncovalent Peptide Complex as a Model for an Early Folding Intermediate of Cytochrome c," Biochemistry, 32, 10271-10276.
  
  
• Carey, J., Combatti, N., Lewis, D.E.A., & Lawson, C.L. (1993) "Cocrystals of E. coli trp Repressor Bound to an Alternative Operator DNA Sequence," J. Mol. Biol., 234, 496-498.
  
  
• Lewis, D.E.A., & Carey, J. (1993) "Analysis of trp Repressor-DNA Interactions Using Gel Electrophoresis," Electrophoresis, 14, 713-719.
  
  
• Jin, L., Yang, J., & Carey, J. (1993) "Thermodynamic Analysis of Ligand Binding to trp Repressor," Biochemistry, 32, 7302-7309.
  
  
• Tian, G., Lim, D., Carey, J., & Maas, W. K. (1992) "Binding of the Arginine Repressor of E. coli K-12 to Its Operator." J. Mol. Biol. 226, 387-397.
  
  
• Tasayco, M.-L. & Carey, J. (1992) "Ordered Self-Assembly of Polypeptide Fragments to Form Nativelike Dimeric trp Repressor." Science, 255, 594-597.
  
  
• Carey, J., Lewis, D.E.A., Lavoie, T. A., & Yang, J. (1991) "How Does trp Repressor Bind to Its Operator?" J. Biol. Chem., 266, 24509-24513.
  
  
• Carey, J. (1991) "Gel Retardation" in Methods in Enzymology (R.T. Sauer, ed.), 208, 103-117.
  
  
• Arrowsmith, C.H., Carey, J., Treat-Clemons, L., and Jardetzky, O. (1989) "NMR Assignments for the Amino-terminal Residues of trp Repressor and Their Role in DNA Binding." Biochemistry, 28, 3875.
  
  
• Carey, J. (1989) "trp Repressor Arms Contribute Binding Energy without Occupying Unique Locations on DNA." J. Biol. Chem., 264, 1941.
  
  
• Carey, J. (1988) "Gel Retardation at Low pH Resolves trp Repressor-DNA Complexes for Quantitative Study." Proc. Natl. Acad. Sci., 85, 975.

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