Daniel Yasumasa Takahashi
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* = equal contribution
(alphabetical order for mathematical articles)
# = co-corresponding authors
Vocal learning via social reinforcement by infant marmoset
monkeys.
Current
Biology, v. 27, 1844-1852, doi:
10.1016/j.cub.2017.05.004, 2017
#Takahashi D.Y., Liao D.A., #Ghazanfar A.A.
Vocal development in a Waddington landscape.
eLife,
6:e20782. doi: 10.7554/eLife.20782, 2017
*Teramoto Y., *#Takahashi
D.Y., #Holmes P., #Ghazanfar A.A.
Arousal
dynamics drive vocal production in marmoset monkeys.
Journal of Neurophysiology,
early access doi:10.1152/jn.00136.2016
Borjon J.I., #Takahashi
D.Y., Cervantes D.C. and #Ghazanfar
A.A.
Early development of turn-taking with
parents shapes vocal acoustics in infant marmoset monkeys.
Philosophical Transaction of Royal
Society B, v 371, doi:
10.1098/rstb.2015.0370, 2016
*Takahashi D.Y., *Fenley A.R. and Ghazanfar
A.A.
The
developmental dynamics of marmoset monkey vocal production.
Science, v. 349,
730-734, 2015
Takahashi D.Y., Fenley A.R., Teramoto Y.,
Narayanan D.Z., Borjon J.I., Holmes P. and Ghazanfar A.A.
Supplementary
material
Cooperative
vocal control in marmoset monkeys via vocal feedback.
Journal of Neurophysiology,
v. 114, 274-283, 2015
Choi J.Y., #Takahashi D.Y. and
#Ghazanfar A.A.
The
evolution of speech: vision, rhythm, cooperation.
Trends in Cognitive Sciences,
v. 18, 543-553, 2014
Ghazanfar A.A. and Takahashi D.Y.
Facial
expressions and the evolution of the speech rhythm.
Journal of Cognitive Neuroscience,
v. 26, 1196-1207, 2014
Ghazafar A. and Takahashi D.Y.
Coupled
oscillator dynamics of vocal turn-taking in monkeys.
Current Biology, v. 23,
2162-2168, 2013
Takahashi D.Y.,
Narayanan D.Z., Ghazanfar A.A.
Cineradiography
of monkey lip-smacking reveals putative precursors of speech dynamics.
Current Biology, v. 22, p.
1176-1186, 2012
Ghazanfar A.A., Takahashi D.Y., Mathur N.,
Fitch W.T.
Correlation
between graphs with an application to brain network analysis.
Computational Statistics & Data
Analysis, v. 109, 76-92, 2017
Fujita A., Takahashi D.Y., Balardin J.B., Vidal M.C., Sato J.R.
A statistical
method to distinguish functional brain networks.
Frontiers in Neuroscience, v. 11,
doi:10.3389/fnins.2017.00066, 2017
Fujita A., Vidal M.C., Takahashi D.Y.
ANOCVA in R: A
Software to Compare Clusters between Groups and Its Application to the Study of
Autism Spectrum Disorder.
Frontiers in Neuroscience, v. 11,
doi:10.3389/fnins.2017.00016, 2017
Vidal M.C., Sato J.R., Balardin J.B., Takahashi D.Y., Fujita A.
Statistical
Methods in Graphs: Parameter Estimation, Model Selection, and Hypothesis Test.
Mathematical Foundations and Applications
of Graph Entropy, v. 98, 183-202, 2016
Santos S.S., Takahashi D.Y., Sato
J.R., Ferreira C.E., Fujita A.
Directed
Transfer function: Unified asymptotic theory and some of its implications.
IEEE Transactions of Biomedical
Engineering, early access 10.1109/TBME.2016.2550199,
2016
Baccalá L.A., Takahashi
D.Y. and Sameshima, K.
Sharp
oracle inequalities and slope heuristic for specification probabilities
estimation in discrete random fields.
Bernoulli, v. 22, 325-344,
2016
*Lerasle M. and *Takahashi D.Y.
MATLAB
routines
On
statistical performance of Granger-causal connectivity estimators
Brain informatics,
10.1007/s40708-015-0015-1, 1-15, 2015
Sameshima K., Takahashi D.Y., and Baccalá
L.A.
Identifying
interacting pairs of sites in Ising models on a
countable set
Brazilian Journal of Probability and
Statistics, v. 29, 443-459, 2015
*Galves A., *Orlandi E.,
and *Takahashi D.Y.
A
non-parametric statistical test to compare clusters with applications in
functional magnetic resonance imaging data.
Statistics in Medicine, v.
33, 4949-4962, 2014
Fujita A., Takahashi D.Y.,
Patriota A.G., Sato J.R.
Canonical
information flow decomposition among neural structure subsets.
Frontiers in Neuroinformatics,
doi: 10.3389/fninf.2014.00049, 2014
Takahashi D.Y., Baccalá L.A., Sameshima K.
A
non-parametric method to estimate the number of clusters.
Computational Statistics and Data
Analysis, v. 73, 27-39, 2014
Fujita A., Takahashi D.Y.,
Patriota A.
On the
statistical performance of connectivity estimators in the frequency domain.
Lecture Notes in Computer Science,
v. 8609, 412-423, 2014
Sameshima K., Takahashi D.Y., and Baccalá
L.A.
A
comparative study of statistical methods used to identify dependencies between
gene expression signals
Briefing in Bioinformatics, doi: 10.1093/bib/bbt051, 2013
Santos S.S., Takahashi D.Y.,
Nakata A., Fujita A.
Unified
asymptotic theory for all partial directed coherence forms
Philosophical Transactions of the Royal
Society A, v. 371, 20120158, 2013
Baccalá L.A., de Brito
C.S., Takahashi D.Y.,
Sameshima K.
Measuring
network's entropy in ADHD: A new approach to investigate neuropsychiatric
disorders
Neuroimage,
v77, p. 44-51, 2013
Sato J.R.,Takahashi D.Y., Hoexeter
M.Q., Massirer K.M., Fujita A.
Discriminating
different classes of biological networks by analyzing the graphs spectra
distribution.
PLoS ONE, 7(12):
e49949. doi:10.1371/journal.pone.0049949, 2012
Takahashi D.Y., Sato
J.R., Ferreira C.E., Fujita A.
An
oracle approach for interaction neighborhood estimation in random fields.
Electronic Journal of Statistics, v
5, p. 534-571, 2011
*Lerasle M. and *Takahashi D.Y.
MATLAB routines used to run the experiments
Information
theoretic interpretation of frequency domain connectivity measures.
Biological Cybernetics,
v.103, p. 463-469, 2010.
Takahashi D.Y., Baccalá L.A. and Sameshima K.
Frequency domain
connectivity: an information theoretic perspective.
In: "Proceedings of the 32nd Annual
International Conference of the IEEE Engineering in Medicine and Biology
Society, Buenos Aires", IEEE Press, pp 1726–1729, 2010
Takahashi D.Y., Baccalá L.A., Sameshima K.
Asymptotic
behavior of generalized partial directed coherence.
In: "Proceedings of the 32nd Annual
International Conference of the IEEE Engineering in Medicine and Biology
Society, Buenos Aires", IEEE Press, pp xxx, 2010
Brito C.N.S., Baccalá
L.A., Takahashi D.Y.,
Sameshima K.
Hyperdopaminergia and NMDA Receptor Hypofunction
Disrupt Neural Phase Signaling.
The Journal of Neuroscience,
v. 29, p. 8215-8224, 2009.
Dzirasa K., Ramsey A. J., Takahashi D.Y., Stapleton
J., Potes J.M., Williams J.K.,Gainetdinov
R.R., Sameshima K., Caron M.G., Nicolelis
M.A.L.
Frequency
domain connectivity identification: An application of partial directed
coherence in fMRI.
Human Brain Mapping, v. 30,
p. 452-461, 2009.
Sato J.R., Takahashi D.Y.,
Arcuri S.M., Sameshima K., Morettin P.A., Baccalá L.A.
Partial
directed coherence asymptotics for VAR processes of
infinite order.
International Journal of Bioelectromagnetism, v. 10, p. 31-36, 2008.
Takahashi D.Y., Baccalá L.A., Sameshima K.
Connectivity
Inference via Partial Directed Coherence.
Journal of Applied Statistics,
v. 34, p. 1259-1273, 2007.
Takahashi D.Y., Baccalá L.A., Sameshima K.
A
method to produce evolving functional connectivity maps during the course of an
fMRI experiment using wavelet based time-varying Granger causality.
NeuroImage,
v. 31, p. 187-196, 2006.
Sato J.R., Felix M. de M., Takahashi
D.Y., Amaro Junior E., Brammer M.J., Morettin P.A.
Intervention
Models in Functional Connectivity Identification Applied to fMRI.
International Journal of Biomedical
Imaging, v. 2006, p. 1-7, 2006.
Sato J.R., Takahashi D.Y.,
Cardoso E.F., Martin M.G.M., Amaro Junior E., Morettin P.A.
Dynamic
uniqueness for stochastic chains with unbounded memory.
Stochastic Processes and their Applications, doi:
10.1016/j.spa.2017.06.004, 2017
*Gallesco C., *Gallo S., *Takahashi D.Y.
Attractive
regular stochastic chains: perfect simulation and phase transition.
Ergodic Theory and Dynamical System, v. 34,
1567-1586, 2014
*Gallo S. and *Takahashi D.Y.
Explicit
estimates in the Bramson-Kalikow model
Nonlinearity, v. 27,
2281-2296, 2014
*Gallesco C., *Gallo S., *Takahashi D.Y.
Markov approximations of chains of
infinite order in the $\bar{d}$-metric
Markov Processes and Related Fields,
v. 19, 51-82, 2013
*Gallo S., *Lerasle M., *Takahashi D.Y.
Alzheimer's
disease diagnosis disclosure in Brazil: a survey of specialized physicians'
current practice and attitudes.
International Psychogeriatrics,
v. 20, p. 471-481, 2008.
Raicher I., Shimizu M., Takahashi D.Y., Nitrini R., Caramelli P.
Disclosure
of the diagnosis of Alzheimer's disease: caregivers' opinions in a Brazilian
sample.
Arquivos de Neuro-Psiquiatria,
v. 66, p. 625-630, 2008.
Shimizu M., Raicher I., Takahashi D.Y., Caramelli P., Nitrini R.
qEEG spectral peak in Alzheimer's disease: a possible
tool for treatment follow-up.
Dementia & neuropsychologia,
v. 2, p. 9-12, 2008.
Raicher I., Takahashi D.Y., Kanda P.A.M., Nitrini
R., Anghinah R.
Brief cognitive
evaluation of patients attended in a general neurological outpatient
clinic.
Arquivos de Neuro-Psiquiatria,
v. 65, p. 299-303, 2007.
Vittielo A.P., Ciriaco
J.G., Takahashi D.Y.,
Nitrini R, Caramelli P.
Mortality
from dementia in a community-dwelling Brazilian population
.
International Journal of Geriatric
Psychiatry, v. 20, n. 3, p. 247-253, 2005.
Nitrini R., Caramelli
P., Herrera E., de Castro I., Bahia V.S., Anghinah
R., Caixeta L., Radanovic
M., Charchat-Fichman H., Porto C.S., Carthery M.T., Hartmann A.P.B.J., Huang N., Smid J., Lima P., Takahashi D.Y., Takada L.T.
Incidence
of dementia in a community-dwelling Brazilian population.
Alzheimer Disease and Associated
Disorders, v. 18, n. 4, p. 241-246, 2005.
Nitrini R., Caramelli
P., Herrera E., Bahia V.S., Caixeta L., Radanovic M., Anghinah R., Charchat-Fichman H., Porto C.S., Carthery
M.T., Hartmann A.P.B.J., Huang N., Smid J., Lima P.,
Takada, L.T., Takahashi, D.Y.
EEG alpha band
coherence analysis in healthy adults: preliminary results.
Arquivos de Neuro-Psiquiatria,
Brasil, v. 63, n. 1, p. 83-86, 2005.
Anghinah R., Caramelli
P., Takahashi D.Y.,
Nitrini R., Sameshima K.
Hyperphosphorylated tau protein in the cerebrospinal fluid
of patients with Alzheimer's disease and other dementias: preliminary
findings.
Arquivos de Neuro-Psiquiatria,
v. 62, n. 3b, p. 751-755, 2004.
Hartmann A.P.B.J., de Almeida S.M., Livramento
J.A., Nitrini R., Takahashi D.Y., Caramelli P.
Comparison
of of virtual cystoscopy and transabdominal
ultrasonography with conventional cystoscopy for bladder tumor detection.
Journal of Endourology,
v. 22, p. 1725-1729, 2008.
Lopes R.I., Nogueira L., Albertotti
C.J., Takahashi D.Y.,
Lopes R.N.
Comparison
between Acoustic Rhinometry, Nasal Inspiratory Peak
Flow, and Table of Scores in Patients with Rhitinis.
Arquivos de Otorrinolaringorologia,
v. 9, n. 3, p. 203-211, 2005.
da Costa G.G.O., Ctenas B.B., Takahashi D.Y., Mion O., Mello Junior J.F., Butugan
O.
Avaliando a complexidade da dinâmica cardiovascular por entropia amostral.
Revista Brasileira de Hipertenção, v. 12, n. 1, p. 27-32, 2005.
Sameshima K., Takahashi D.Y., Baccalá L.A.
Medidas de fluxo de informação com aplicação
em neurociência.
(Measures of information flow with application in neuroscience)
My thesis was
written in Portuguese. I tried to unify and understand the relationship between
different measures of dependence used in neuroscience, physics, econometrics
and information theory.